Genome Details
Selected Rep_genome_ID: HRGMv2_4186
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Vibrionaceae
Genus
Photobacterium
Species
Photobacterium damselae
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4186 | 3,939,352 | 98.85% | 0.828% | Japan | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4186_CGC20 | CGCFAM_00070 | Yes | 6 | 2 | |
| HRGMv2_4186_CGC35 | CGCFAM_00433 | Yes | 8 | 1 | |
| HRGMv2_4186_CGC17 | CGCFAM_00726 | Yes | 6 | 2 | host glycan |
| HRGMv2_4186_CGC2 | CGCFAM_00733 | Yes | 3 | 1 | |
| HRGMv2_4186_CGC15 | CGCFAM_00883 | Yes | 4 | 1 | |
| HRGMv2_4186_CGC18 | CGCFAM_02021 | Yes | 6 | 1 | |
| HRGMv2_4186_CGC3 | CGCFAM_02185 | Yes | 9 | 3 | |
| HRGMv2_4186_CGC11 | CGCFAM_07203 | Yes | 3 | 1 | |
| HRGMv2_4186_CGC34 | CGCFAM_07597 | Yes | 3 | 2 | |
| HRGMv2_4186_CGC12 | CGCFAM_10549 | Yes | 6 | 1 |
Top CAZyme Families