dbCAN Logo

Cluster: HRGMv2_4186_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4186_70 HRGMv2_4186_70_3 1057 2730 - GH13_29
TC HRGMv2_4186_70 HRGMv2_4186_70_4 2798 4252 - 4.A.1.2.4
NULL(UNKNOWN) HRGMv2_4186_70 HRGMv2_4186_70_5 4555 4860 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_4186_70 HRGMv2_4186_70_6 4866 5816 - LacI
TC HRGMv2_4186_70 HRGMv2_4186_70_7 5940 6374 - 4.A.6.1.16
TC HRGMv2_4186_70 HRGMv2_4186_70_8 6441 7325 - 4.A.6.1.4
TC HRGMv2_4186_70 HRGMv2_4186_70_9 7315 8097 - 4.A.6.1.4
TC HRGMv2_4186_70 HRGMv2_4186_70_10 8117 8590 - 4.A.6.1.4
Gene ID: HRGMv2_4186_70_3
Type: CAZyme
Location: 1057 - 2730 (-)
Gene ID: HRGMv2_4186_70_4
Type: TC
Location: 2798 - 4252 (-)
Gene ID: HRGMv2_4186_70_5
Type:
Location: 4555 - 4860 (+)
Gene ID: HRGMv2_4186_70_6
Type: TF
Location: 4866 - 5816 (-)
Gene ID: HRGMv2_4186_70_7
Type: TC
Location: 5940 - 6374 (-)
Gene ID: HRGMv2_4186_70_8
Type: TC
Location: 6441 - 7325 (-)
Gene ID: HRGMv2_4186_70_9
Type: TC
Location: 7315 - 8097 (-)
Gene ID: HRGMv2_4186_70_10
Type: TC
Location: 8117 - 8590 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List