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Cluster: HRGMv2_4186_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4186_13 HRGMv2_4186_13_86 112098 113774 + 3.A.1.5.6
TC HRGMv2_4186_13 HRGMv2_4186_13_87 113921 114907 + 3.A.1.5.16
TC HRGMv2_4186_13 HRGMv2_4186_13_88 114910 115935 + 3.A.1.5.14
TC HRGMv2_4186_13 HRGMv2_4186_13_89 115935 116906 + 3.A.1.5.15
TC HRGMv2_4186_13 HRGMv2_4186_13_90 116932 117933 + 3.A.1.5.20
CAZyme HRGMv2_4186_13 HRGMv2_4186_13_91 118030 119769 + GH9
pfam HRGMv2_4186_13 HRGMv2_4186_13_92 119762 120655 + BcrAD_BadFG
CAZyme HRGMv2_4186_13 HRGMv2_4186_13_93 120657 122594 + GH20
CAZyme HRGMv2_4186_13 HRGMv2_4186_13_94 122627 125032 + GH94
Gene ID: HRGMv2_4186_13_86
Type: TC
Location: 112098 - 113774 (+)
Gene ID: HRGMv2_4186_13_87
Type: TC
Location: 113921 - 114907 (+)
Gene ID: HRGMv2_4186_13_88
Type: TC
Location: 114910 - 115935 (+)
Gene ID: HRGMv2_4186_13_89
Type: TC
Location: 115935 - 116906 (+)
Gene ID: HRGMv2_4186_13_90
Type: TC
Location: 116932 - 117933 (+)
Gene ID: HRGMv2_4186_13_91
Type: CAZyme
Location: 118030 - 119769 (+)
Gene ID: HRGMv2_4186_13_92
Type: pfam
Location: 119762 - 120655 (+)
Gene ID: HRGMv2_4186_13_93
Type: CAZyme
Location: 120657 - 122594 (+)
Gene ID: HRGMv2_4186_13_94
Type: CAZyme
Location: 122627 - 125032 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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