Genome Details
Selected Rep_genome_ID: HRGMv2_4009
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Duncaniella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR025776 | 2,491,001 | 91.89% | 1.58% | China | Asia | CGMR |
| HRGMv2_4009 | 2,904,013 | 99.05% | 0.754% | Italy | Europe | HRGM |
| Rep_402 | 2,556,262 | 96.4151% | 1.06918% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4009_CGC2 | CGCFAM_00001 | Yes | 7 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_4009_CGC33 | CGCFAM_00022 | Yes | 3 | 1 | |
| HRGMv2_4009_CGC15 | CGCFAM_00044 | Yes | 16 | 9 | beta-mannan/xylan/beta-glucan |
| HRGMv2_4009_CGC23 | CGCFAM_00069 | Yes | 4 | 1 | |
| HRGMv2_4009_CGC10 | CGCFAM_00083 | Yes | 3 | 1 | beta-glucan |
| HRGMv2_4009_CGC22 | CGCFAM_00431 | Yes | 5 | 1 | |
| HRGMv2_4009_CGC21 | CGCFAM_00531 | Yes | 8 | 1 | |
| HRGMv2_4009_CGC32 | CGCFAM_00608 | Yes | 3 | 1 | |
| HRGMv2_4009_CGC6 | CGCFAM_00794 | Yes | 4 | 2 | |
| HRGMv2_4009_CGC14 | CGCFAM_01094 | Yes | 9 | 7 | |
| HRGMv2_4009_CGC16 | CGCFAM_01336 | Yes | 3 | 1 | |
| HRGMv2_4009_CGC19 | CGCFAM_01376 | Yes | 5 | 2 | |
| HRGMv2_4009_CGC26 | CGCFAM_01767 | Yes | 4 | 1 | |
| HRGMv2_4009_CGC12 | CGCFAM_02909 | Yes | 4 | 1 | |
| HRGMv2_4009_CGC4 | CGCFAM_04108 | Yes | 4 | 1 | |
| HRGMv2_4009_CGC40 | CGCFAM_04589 | Yes | 8 | 3 | |
| HRGMv2_4009_CGC42 | CGCFAM_10396 | Yes | 3 | 1 | |
| HRGMv2_4009_CGC1 | CGCFAM_10472 | Yes | 3 | 1 | |
| HRGMv2_4009_CGC28 | CGCFAM_10524 | Yes | 5 | 2 |
Top CAZyme Families