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Cluster: HRGMv2_4009_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4009_59 HRGMv2_4009_59_2 1592 3121 + CBM91 | GH43_10
CAZyme HRGMv2_4009_59 HRGMv2_4009_59_3 3134 5143 - GH127
NULL(UNKNOWN) HRGMv2_4009_59 HRGMv2_4009_59_4 5364 5513 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4009_59 HRGMv2_4009_59_5 6162 7346 + GT2
pfam HRGMv2_4009_59 HRGMv2_4009_59_6 7333 7704 + FolB
TC HRGMv2_4009_59 HRGMv2_4009_59_7 7774 9102 + 9.B.10.1.1
TC HRGMv2_4009_59 HRGMv2_4009_59_8 9099 10883 + 3.A.1.120.6
TC HRGMv2_4009_59 HRGMv2_4009_59_9 11078 12499 + 1.A.11.1.4
Gene ID: HRGMv2_4009_59_2
Type: CAZyme
Location: 1592 - 3121 (+)
Gene ID: HRGMv2_4009_59_3
Type: CAZyme
Location: 3134 - 5143 (-)
Gene ID: HRGMv2_4009_59_4
Type:
Location: 5364 - 5513 (+)
Gene ID: HRGMv2_4009_59_5
Type: CAZyme
Location: 6162 - 7346 (+)
Gene ID: HRGMv2_4009_59_6
Type: pfam
Location: 7333 - 7704 (+)
Gene ID: HRGMv2_4009_59_7
Type: TC
Location: 7774 - 9102 (+)
Gene ID: HRGMv2_4009_59_8
Type: TC
Location: 9099 - 10883 (+)
Gene ID: HRGMv2_4009_59_9
Type: TC
Location: 11078 - 12499 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Duncaniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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