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Cluster: HRGMv2_4009_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4009_18 HRGMv2_4009_18_21 22228 22950 + 1.B.44.1.1
pfam HRGMv2_4009_18 HRGMv2_4009_18_22 22960 23967 + PorP_SprF
TC HRGMv2_4009_18 HRGMv2_4009_18_23 23969 25408 + 9.A.25.1.1
TC HRGMv2_4009_18 HRGMv2_4009_18_24 25424 26359 + 9.A.25.1.1
TC HRGMv2_4009_18 HRGMv2_4009_18_25 26418 27983 + 9.A.25.1.1
pfam HRGMv2_4009_18 HRGMv2_4009_18_26 28018 29166 + GldN
CAZyme HRGMv2_4009_18 HRGMv2_4009_18_27 29415 30329 + GT2
TC HRGMv2_4009_18 HRGMv2_4009_18_28 30535 33438 + 2.A.6.4.2
Gene ID: HRGMv2_4009_18_21
Type: TC
Location: 22228 - 22950 (+)
Gene ID: HRGMv2_4009_18_22
Type: pfam
Location: 22960 - 23967 (+)
Gene ID: HRGMv2_4009_18_23
Type: TC
Location: 23969 - 25408 (+)
Gene ID: HRGMv2_4009_18_24
Type: TC
Location: 25424 - 26359 (+)
Gene ID: HRGMv2_4009_18_25
Type: TC
Location: 26418 - 27983 (+)
Gene ID: HRGMv2_4009_18_26
Type: pfam
Location: 28018 - 29166 (+)
Gene ID: HRGMv2_4009_18_27
Type: CAZyme
Location: 29415 - 30329 (+)
Gene ID: HRGMv2_4009_18_28
Type: TC
Location: 30535 - 33438 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Duncaniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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