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Cluster: HRGMv2_4009_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4009_8 HRGMv2_4009_8_25 36350 39592 - 1.B.14.6.1
CAZyme HRGMv2_4009_8 HRGMv2_4009_8_26 39766 41076 - GH5_7
CAZyme HRGMv2_4009_8 HRGMv2_4009_8_27 41073 42527 - CE20
CAZyme HRGMv2_4009_8 HRGMv2_4009_8_28 42527 43555 - GH5_2
TF HRGMv2_4009_8 HRGMv2_4009_8_29 43585 44460 - HTH_AraC | HTH_AraC
TF HRGMv2_4009_8 HRGMv2_4009_8_30 44771 48799 - HTH_AraC | HTH_AraC
TC HRGMv2_4009_8 HRGMv2_4009_8_31 49228 52386 + 1.B.14.6.1
pfam HRGMv2_4009_8 HRGMv2_4009_8_32 52405 54096 + SusD_RagB | SusD-like_3
pfam HRGMv2_4009_8 HRGMv2_4009_8_33 54119 55528 + SGBP_B_XBD
CAZyme HRGMv2_4009_8 HRGMv2_4009_8_34 55553 57883 + GH10
CAZyme HRGMv2_4009_8 HRGMv2_4009_8_35 58085 59773 + GH35
CAZyme HRGMv2_4009_8 HRGMv2_4009_8_36 59784 61433 + CE20 | CE20
TC HRGMv2_4009_8 HRGMv2_4009_8_37 61445 62872 + 2.A.2.3.2
CAZyme HRGMv2_4009_8 HRGMv2_4009_8_38 62885 64018 + GH10
CAZyme HRGMv2_4009_8 HRGMv2_4009_8_39 64015 64989 + GH43_1
CAZyme HRGMv2_4009_8 HRGMv2_4009_8_40 64982 66676 + GH67
Gene ID: HRGMv2_4009_8_25
Type: TC
Location: 36350 - 39592 (-)
Gene ID: HRGMv2_4009_8_26
Type: CAZyme
Location: 39766 - 41076 (-)
Gene ID: HRGMv2_4009_8_27
Type: CAZyme
Location: 41073 - 42527 (-)
Gene ID: HRGMv2_4009_8_28
Type: CAZyme
Location: 42527 - 43555 (-)
Gene ID: HRGMv2_4009_8_29
Type: TF
Location: 43585 - 44460 (-)
Gene ID: HRGMv2_4009_8_30
Type: TF
Location: 44771 - 48799 (-)
Gene ID: HRGMv2_4009_8_31
Type: TC
Location: 49228 - 52386 (+)
Gene ID: HRGMv2_4009_8_32
Type: pfam
Location: 52405 - 54096 (+)
Gene ID: HRGMv2_4009_8_33
Type: pfam
Location: 54119 - 55528 (+)
Gene ID: HRGMv2_4009_8_34
Type: CAZyme
Location: 55553 - 57883 (+)
Gene ID: HRGMv2_4009_8_35
Type: CAZyme
Location: 58085 - 59773 (+)
Gene ID: HRGMv2_4009_8_36
Type: CAZyme
Location: 59784 - 61433 (+)
Gene ID: HRGMv2_4009_8_37
Type: TC
Location: 61445 - 62872 (+)
Gene ID: HRGMv2_4009_8_38
Type: CAZyme
Location: 62885 - 64018 (+)
Gene ID: HRGMv2_4009_8_39
Type: CAZyme
Location: 64015 - 64989 (+)
Gene ID: HRGMv2_4009_8_40
Type: CAZyme
Location: 64982 - 66676 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Duncaniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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