Genome Details
Selected Rep_genome_ID: HRGMv2_3784
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA1829
Species
UBA1829 sp002338895
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR037729 | 4,202,571 | 93.89% | 2.7% | China | Asia | CGMR |
| HRGMv2_3784 | 4,017,511 | 93.88% | 2.027% | Tanzania | Africa | HRGM |
| MGYG000000345 | 3,773,289 | 93.21% | 2.03% | Sweden | Europe | UHGG |
| Rep_738 | 4,209,856 | 93.8895% | 2.7027% | NA | NA | WIS |
| SW036_bin.11 | 4,122,650 | 93.89% | 2.07% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3784_CGC48 | CGCFAM_00157 | Yes | 4 | 1 | |
| HRGMv2_3784_CGC8 | CGCFAM_01966 | Yes | 11 | 3 | |
| HRGMv2_3784_CGC35 | CGCFAM_02451 | Yes | 4 | 1 | |
| HRGMv2_3784_CGC11 | CGCFAM_02527 | Yes | 8 | 1 | |
| HRGMv2_3784_CGC4 | CGCFAM_03288 | Yes | 4 | 1 | |
| HRGMv2_3784_CGC49 | CGCFAM_03765 | Yes | 6 | 3 | |
| HRGMv2_3784_CGC51 | CGCFAM_03907 | Yes | 3 | 1 | |
| HRGMv2_3784_CGC18 | CGCFAM_04713 | Yes | 8 | 4 | |
| HRGMv2_3784_CGC22 | CGCFAM_04714 | Yes | 5 | 1 | |
| HRGMv2_3784_CGC29 | CGCFAM_07187 | Yes | 4 | 1 | |
| HRGMv2_3784_CGC12 | CGCFAM_07189 | Yes | 10 | 1 | |
| HRGMv2_3784_CGC40 | CGCFAM_07190 | Yes | 4 | 1 | |
| HRGMv2_3784_CGC1 | CGCFAM_07191 | Yes | 6 | 3 | |
| HRGMv2_3784_CGC6 | CGCFAM_07192 | Yes | 6 | 2 | |
| HRGMv2_3784_CGC7 | CGCFAM_10079 | Yes | 8 | 4 |
Top CAZyme Families