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Cluster: HRGMv2_3784_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3784_23 HRGMv2_3784_23_9 10332 12023 + 3.A.1.106.15
CAZyme HRGMv2_3784_23 HRGMv2_3784_23_10 12156 13469 + GH109
pfam HRGMv2_3784_23 HRGMv2_3784_23_11 13516 14970 + Mannitol_dh | Mannitol_dh_C
pfam HRGMv2_3784_23 HRGMv2_3784_23_12 14984 16420 + GD_AH_second | SAF | GD_AH_C
CAZyme HRGMv2_3784_23 HRGMv2_3784_23_13 16486 18165 + GH2
NULL(UNKNOWN) HRGMv2_3784_23 HRGMv2_3784_23_14 18488 20035 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3784_23 HRGMv2_3784_23_15 20256 21890 - GH39
CAZyme HRGMv2_3784_23 HRGMv2_3784_23_16 22074 25385 - GH148
Gene ID: HRGMv2_3784_23_9
Type: TC
Location: 10332 - 12023 (+)
Gene ID: HRGMv2_3784_23_10
Type: CAZyme
Location: 12156 - 13469 (+)
Gene ID: HRGMv2_3784_23_11
Type: pfam
Location: 13516 - 14970 (+)
Gene ID: HRGMv2_3784_23_12
Type: pfam
Location: 14984 - 16420 (+)
Gene ID: HRGMv2_3784_23_13
Type: CAZyme
Location: 16486 - 18165 (+)
Gene ID: HRGMv2_3784_23_14
Type:
Location: 18488 - 20035 (-)
Gene ID: HRGMv2_3784_23_15
Type: CAZyme
Location: 20256 - 21890 (-)
Gene ID: HRGMv2_3784_23_16
Type: CAZyme
Location: 22074 - 25385 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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