PROTEIN: HRGMv2_3784_23_14
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Protein File & Metadata
Source:
HRGMv2_3784_23_14.pdb
Genome ID:
Protein ID:
HRGMv2_3784_23_14
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Protein Sequence
MNLIPEQSGT TPNYWCTWGI QNSSLQSREH AENLVFTGDQ GAHSARENLN AELLFGKNGW 60 SDQFDGIRGD LSLMLDDGWD VAYGIHPKEN LSSFGSVLPD PQRFPFCTGS PEERLEKLNR 120 KVQSRGWRDV GLWIAPQVTG ETREHPATGK EQETFLRDRL RWTSEAGIRL WKVDWGIRSG 180 DLQYRRLISE IAREFNPEIR IEHSVGLSPL NAAETSPEGK QWGSGRFADM GDDLLQKISC 240 LLSFSDMVRI YDLLYPLTVP TSIDRLAFYL SCSDGVLLNV ENELYLGAAS GTSFGVMRSE 300 RGPEPQIDLG PIQSRDRKIL ELFRAVRWQR IAPAWKSSYQ EPVTLSKTIL TDCWTYRPDT 360 VWLKRVFNQK ISQGAPAVLA RNLPLPQVLS RSGEVPYLVT SRHPNGAISI GFLPRLSDDR 420 GFYTPPATVA LSIPCEGVPI GVFGVFESLR FPVANGKKRL IGQDLAQSEA VDLSAFLQIH 480 ENIAEISGEV VKALTVSKEG DFSDPGIVLK LLPET 515
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P17050-F1-model_v4 | 8 | 515 | 23 | 407 | 0.5872 |
0.7072 |
| AF-I1L6Y9-F1-model_v4 | 8 | 513 | 51 | 410 | 0.5668 |
0.7225 |
| AF-K7MJ32-F1-model_v4 | 8 | 513 | 58 | 418 | 0.564 |
0.7236 |
| AF-Q9FXT4-F1-model_v4 | 9 | 512 | 62 | 417 | 0.5634 |
0.7314 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D5UJJ0-F1-model_v4 | GH27 | 8 | 513 | 4 | 440 | 0.5976 |
0.6654 |
| AF-A0A4Y6UYZ0-F1-model_v4 | GH27 | 9 | 514 | 8 | 433 | 0.5976 |
0.6742 |
| AF-A4FEE2-F1-model_v4 | GH27 | 13 | 513 | 1 | 380 | 0.591 |
0.6937 |
| AF-A0A5B8JPH4-F1-model_v4 | GH27 | 9 | 511 | 8 | 429 | 0.5902 |
0.6683 |
| AF-E0RJT0-F1-model_v4 | GH27 | 9 | 511 | 8 | 429 | 0.5902 |
0.6682 |
| AF-A0A4P8TGI2-F1-model_v4 | GH27 | 9 | 514 | 7 | 440 | 0.5901 |
0.6605 |
| AF-A0A1D7QLA8-F1-model_v4 | GH27 | 9 | 514 | 32 | 451 | 0.5866 |
0.6827 |
| AF-A0A7L9TXX9-F1-model_v4 | GH27 | 13 | 513 | 1 | 454 | 0.5858 |
0.6394 |
| AF-D2Q6W4-F1-model_v4 | GH27 | 13 | 513 | 1 | 454 | 0.5855 |
0.6391 |
| AF-A0A0A0UDB2-F1-model_v4 | GH27 | 13 | 513 | 1 | 454 | 0.5845 |
0.6378 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2P0VP48 | GH27 | 9 | 513 | 1 | 356 | 0.6013 |
0.7239 |
| A0A4P6YBC4 | GH27 | 9 | 513 | 40 | 486 | 0.5668 |
0.6458 |
| F0HA27 | GH27 | 8 | 512 | 34 | 409 | 0.5644 |
0.692 |
| UKT64945.1 | GH27 | 8 | 511 | 54 | 475 | 0.5622 |
0.6657 |
| A0A9Q7SF33 | GH27 | 8 | 515 | 42 | 431 | 0.5604 |
0.6815 |
| A0A3G8JVI5 | GH27 | 8 | 511 | 48 | 426 | 0.558 |
0.6928 |
| A0A9Q9DHY9 | GH13 | 5 | 515 | 23 | 480 | 0.5571 |
0.635 |
| A0A223E5I9 | GH13 | 8 | 515 | 25 | 445 | 0.557 |
0.6632 |
| A0A6B8RHZ2 | GH140 | 7 | 515 | 16 | 428 | 0.5517 |
0.6384 |
| A0A2N5NNP4 | GH140 | 7 | 514 | 16 | 427 | 0.5498 |
0.6409 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1uas-assembly1.cif.gz_A | 9 | 513 | 7 | 362 | 0.604 |
0.7333 |
| 3a5v-assembly1.cif.gz_A | 8 | 513 | 6 | 394 | 0.5705 |
0.6699 |
| 3lrm-assembly1.cif.gz_C | 9 | 512 | 10 | 452 | 0.5598 |
0.6232 |
| 4ogz-assembly2.cif.gz_B | 1 | 511 | 9 | 466 | 0.5367 |
0.5876 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9FXT4-F1-model_v4 | 9 | 512 | 62 | 417 | 0.5634 |
0.7314 |