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Cluster: HRGMv2_3784_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3784_11 HRGMv2_3784_11_13 14974 18159 + GH39
pfam HRGMv2_3784_11 HRGMv2_3784_11_14 18298 19494 + MFS_1
TC HRGMv2_3784_11 HRGMv2_3784_11_15 19954 22344 + 2.A.16.2.2
pfam HRGMv2_3784_11 HRGMv2_3784_11_16 22458 23132 + Hexapep | Hexapep_2
pfam HRGMv2_3784_11 HRGMv2_3784_11_17 23214 24260 - Queuosine_synth
CAZyme HRGMv2_3784_11 HRGMv2_3784_11_18 24247 25716 - GT5
peptidase HRGMv2_3784_11 HRGMv2_3784_11_19 25749 26612 - S54.UPW
TC HRGMv2_3784_11 HRGMv2_3784_11_20 26656 27933 - 9.B.174.1.1
pfam HRGMv2_3784_11 HRGMv2_3784_11_21 27947 28435 - dCMP_cyt_deam_1 | MafB19-deam
pfam HRGMv2_3784_11 HRGMv2_3784_11_22 28432 29718 - ThiC_Rad_SAM
CAZyme HRGMv2_3784_11 HRGMv2_3784_11_23 29727 31016 - GT30
Gene ID: HRGMv2_3784_11_13
Type: CAZyme
Location: 14974 - 18159 (+)
Gene ID: HRGMv2_3784_11_14
Type: pfam
Location: 18298 - 19494 (+)
Gene ID: HRGMv2_3784_11_15
Type: TC
Location: 19954 - 22344 (+)
Gene ID: HRGMv2_3784_11_16
Type: pfam
Location: 22458 - 23132 (+)
Gene ID: HRGMv2_3784_11_17
Type: pfam
Location: 23214 - 24260 (-)
Gene ID: HRGMv2_3784_11_18
Type: CAZyme
Location: 24247 - 25716 (-)
Gene ID: HRGMv2_3784_11_19
Type: peptidase
Location: 25749 - 26612 (-)
Gene ID: HRGMv2_3784_11_20
Type: TC
Location: 26656 - 27933 (-)
Gene ID: HRGMv2_3784_11_21
Type: pfam
Location: 27947 - 28435 (-)
Gene ID: HRGMv2_3784_11_22
Type: pfam
Location: 28432 - 29718 (-)
Gene ID: HRGMv2_3784_11_23
Type: CAZyme
Location: 29727 - 31016 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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