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Cluster: HRGMv2_3784_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3784_13 HRGMv2_3784_13_6 7021 7995 - 3.A.1.2.15
TC HRGMv2_3784_13 HRGMv2_3784_13_7 7976 9442 - 3.A.1.2.1
TC HRGMv2_3784_13 HRGMv2_3784_13_8 9455 10288 - 3.A.1.132.3
pfam HRGMv2_3784_13 HRGMv2_3784_13_9 10303 10794 - CTP_transf_like
NULL(UNKNOWN) HRGMv2_3784_13 HRGMv2_3784_13_10 10794 11351 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3784_13 HRGMv2_3784_13_11 11513 12691 + 2.A.21.9.1
TF HRGMv2_3784_13 HRGMv2_3784_13_12 12688 14043 + HTH_8
CAZyme HRGMv2_3784_13 HRGMv2_3784_13_13 14049 15854 + GH20
Gene ID: HRGMv2_3784_13_6
Type: TC
Location: 7021 - 7995 (-)
Gene ID: HRGMv2_3784_13_7
Type: TC
Location: 7976 - 9442 (-)
Gene ID: HRGMv2_3784_13_8
Type: TC
Location: 9455 - 10288 (-)
Gene ID: HRGMv2_3784_13_9
Type: pfam
Location: 10303 - 10794 (-)
Gene ID: HRGMv2_3784_13_10
Type:
Location: 10794 - 11351 (-)
Gene ID: HRGMv2_3784_13_11
Type: TC
Location: 11513 - 12691 (+)
Gene ID: HRGMv2_3784_13_12
Type: TF
Location: 12688 - 14043 (+)
Gene ID: HRGMv2_3784_13_13
Type: CAZyme
Location: 14049 - 15854 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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