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Cluster: HRGMv2_3784_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3784_13 HRGMv2_3784_13_22 26692 28074 + CE7
NULL(UNKNOWN) HRGMv2_3784_13 HRGMv2_3784_13_23 28075 28980 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_3784_13 HRGMv2_3784_13_24 29289 30302 + CSD
TC HRGMv2_3784_13 HRGMv2_3784_13_25 30315 31136 + 3.A.1.27.1
TC HRGMv2_3784_13 HRGMv2_3784_13_26 31138 31893 + 3.A.1.27.1
pfam HRGMv2_3784_13 HRGMv2_3784_13_27 31908 32903 + MlaD
TC HRGMv2_3784_13 HRGMv2_3784_13_28 32974 34833 - 3.A.1.5.20
pfam HRGMv2_3784_13 HRGMv2_3784_13_29 34849 35811 - TonB_2
TC HRGMv2_3784_13 HRGMv2_3784_13_30 35818 36222 - 1.A.30.2.7
TC HRGMv2_3784_13 HRGMv2_3784_13_31 36225 37385 - 1.A.30.2.7
Gene ID: HRGMv2_3784_13_22
Type: CAZyme
Location: 26692 - 28074 (+)
Gene ID: HRGMv2_3784_13_23
Type:
Location: 28075 - 28980 (-)
Gene ID: HRGMv2_3784_13_24
Type: TF
Location: 29289 - 30302 (+)
Gene ID: HRGMv2_3784_13_25
Type: TC
Location: 30315 - 31136 (+)
Gene ID: HRGMv2_3784_13_26
Type: TC
Location: 31138 - 31893 (+)
Gene ID: HRGMv2_3784_13_27
Type: pfam
Location: 31908 - 32903 (+)
Gene ID: HRGMv2_3784_13_28
Type: TC
Location: 32974 - 34833 (-)
Gene ID: HRGMv2_3784_13_29
Type: pfam
Location: 34849 - 35811 (-)
Gene ID: HRGMv2_3784_13_30
Type: TC
Location: 35818 - 36222 (-)
Gene ID: HRGMv2_3784_13_31
Type: TC
Location: 36225 - 37385 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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