Genome Details
Selected Rep_genome_ID: HRGMv2_3737
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Negativicoccaceae
Genus
Negativicoccus
Species
Negativicoccus succinicivorans
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR014051 | 1,191,614 | 94.53% | 1.9% | China | Asia | CGMR |
| HRGMv2_3737 | 1,344,194 | 97.21% | 0.632% | UK | Europe | HRGM |
| MGYG000002903 | 1,204,906 | 94.05% | 0.69% | United States | North America | UHGG |
| Rep_1901 | 1,260,010 | 94.3671% | 1.26582% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3737_CGC2 | CGCFAM_00077 | Yes | 5 | 1 | |
| HRGMv2_3737_CGC5 | CGCFAM_00279 | Yes | 8 | 2 | |
| HRGMv2_3737_CGC3 | CGCFAM_00354 | Yes | 9 | 1 | |
| HRGMv2_3737_CGC7 | CGCFAM_01996 | Yes | 4 | 1 | |
| HRGMv2_3737_CGC6 | CGCFAM_05743 | Yes | 3 | 2 | |
| HRGMv2_3737_CGC8 | CGCFAM_10426 | Yes | 6 | 1 |
Top CAZyme Families