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Cluster: HRGMv2_3737_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3737_3 HRGMv2_3737_3_142 138570 139037 - 9.B.156.1.2
TC HRGMv2_3737_3 HRGMv2_3737_3_143 139030 139767 - 9.A.5.4.2
peptidase HRGMv2_3737_3 HRGMv2_3737_3_144 139963 141099 + M20.UND
pfam HRGMv2_3737_3 HRGMv2_3737_3_145 141137 141916 - SurE
CAZyme HRGMv2_3737_3 HRGMv2_3737_3_146 141916 143178 - GT2
pfam HRGMv2_3737_3 HRGMv2_3737_3_147 143180 143872 - CDP-OH_P_transf
pfam HRGMv2_3737_3 HRGMv2_3737_3_148 143865 144506 - PS_Dcarbxylase
CAZyme HRGMv2_3737_3 HRGMv2_3737_3_149 144509 145249 - GT26
Gene ID: HRGMv2_3737_3_142
Type: TC
Location: 138570 - 139037 (-)
Gene ID: HRGMv2_3737_3_143
Type: TC
Location: 139030 - 139767 (-)
Gene ID: HRGMv2_3737_3_144
Type: peptidase
Location: 139963 - 141099 (+)
Gene ID: HRGMv2_3737_3_145
Type: pfam
Location: 141137 - 141916 (-)
Gene ID: HRGMv2_3737_3_146
Type: CAZyme
Location: 141916 - 143178 (-)
Gene ID: HRGMv2_3737_3_147
Type: pfam
Location: 143180 - 143872 (-)
Gene ID: HRGMv2_3737_3_148
Type: pfam
Location: 143865 - 144506 (-)
Gene ID: HRGMv2_3737_3_149
Type: CAZyme
Location: 144509 - 145249 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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