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Cluster: HRGMv2_3737_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3737_2 HRGMv2_3737_2_90 93464 94141 + 3.A.2.1.6
pfam HRGMv2_3737_2 HRGMv2_3737_2_91 94195 94455 + ATP-synt_C
pfam HRGMv2_3737_2 HRGMv2_3737_2_92 94489 94983 + ATP-synt_B
TC HRGMv2_3737_2 HRGMv2_3737_2_93 94985 95557 + 3.A.2.1.6
TC HRGMv2_3737_2 HRGMv2_3737_2_94 95554 97089 + 3.A.2.1.5
TC HRGMv2_3737_2 HRGMv2_3737_2_95 97094 97960 + 3.A.2.1.5
TC HRGMv2_3737_2 HRGMv2_3737_2_96 97993 99414 + 3.A.2.1.2
TC HRGMv2_3737_2 HRGMv2_3737_2_97 99418 99846 + 3.A.2.1.2
CAZyme HRGMv2_3737_2 HRGMv2_3737_2_98 100022 100852 + CE4
Gene ID: HRGMv2_3737_2_90
Type: TC
Location: 93464 - 94141 (+)
Gene ID: HRGMv2_3737_2_91
Type: pfam
Location: 94195 - 94455 (+)
Gene ID: HRGMv2_3737_2_92
Type: pfam
Location: 94489 - 94983 (+)
Gene ID: HRGMv2_3737_2_93
Type: TC
Location: 94985 - 95557 (+)
Gene ID: HRGMv2_3737_2_94
Type: TC
Location: 95554 - 97089 (+)
Gene ID: HRGMv2_3737_2_95
Type: TC
Location: 97094 - 97960 (+)
Gene ID: HRGMv2_3737_2_96
Type: TC
Location: 97993 - 99414 (+)
Gene ID: HRGMv2_3737_2_97
Type: TC
Location: 99418 - 99846 (+)
Gene ID: HRGMv2_3737_2_98
Type: CAZyme
Location: 100022 - 100852 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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