Cluster: HRGMv2_3737_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3737
- CGC Family ID: CGCFAM_10426
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3737_7 | HRGMv2_3737_7_17 | 16352 | 17173 | - | 3.A.1.24.5 |
| TC | HRGMv2_3737_7 | HRGMv2_3737_7_18 | 17210 | 17863 | - | 3.A.1.24.5 |
| TC | HRGMv2_3737_7 | HRGMv2_3737_7_19 | 17844 | 18887 | - | 3.A.1.24.1 |
| pfam | HRGMv2_3737_7 | HRGMv2_3737_7_20 | 19321 | 21471 | + | Gly_radical | ATP-cone | NRDD |
| pfam | HRGMv2_3737_7 | HRGMv2_3737_7_21 | 21479 | 22015 | + | Fer4_12 |
| CAZyme | HRGMv2_3737_7 | HRGMv2_3737_7_22 | 22383 | 24449 | - | GT51 |
Gene ID: HRGMv2_3737_7_17
Type: TC
Location: 16352 - 17173 (-)
Type: TC
Location: 16352 - 17173 (-)
Gene ID: HRGMv2_3737_7_18
Type: TC
Location: 17210 - 17863 (-)
Type: TC
Location: 17210 - 17863 (-)
Gene ID: HRGMv2_3737_7_19
Type: TC
Location: 17844 - 18887 (-)
Type: TC
Location: 17844 - 18887 (-)
Gene ID: HRGMv2_3737_7_20
Type: pfam
Location: 19321 - 21471 (+)
Type: pfam
Location: 19321 - 21471 (+)
Gene ID: HRGMv2_3737_7_21
Type: pfam
Location: 21479 - 22015 (+)
Type: pfam
Location: 21479 - 22015 (+)
Gene ID: HRGMv2_3737_7_22
Type: CAZyme
Location: 22383 - 24449 (-)
Type: CAZyme
Location: 22383 - 24449 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Negativicoccaceae
Genus
Negativicoccus
Species
Negativicoccus succinicivorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.