Cluster: HRGMv2_3737_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3737
- CGC Family ID: CGCFAM_00077
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3737_1 | HRGMv2_3737_1_260 | 262945 | 264162 | - | 3.A.1.122.2 |
| TC | HRGMv2_3737_1 | HRGMv2_3737_1_261 | 264155 | 264853 | - | 3.A.1.122.2 |
| pfam | HRGMv2_3737_1 | HRGMv2_3737_1_262 | 264862 | 265959 | - | CusB_dom_1 | OEP | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| TC | HRGMv2_3737_1 | HRGMv2_3737_1_263 | 266120 | 267481 | + | 2.A.66.1.21 |
| CAZyme | HRGMv2_3737_1 | HRGMv2_3737_1_264 | 267493 | 268533 | - | GT9 |
Gene ID: HRGMv2_3737_1_260
Type: TC
Location: 262945 - 264162 (-)
Type: TC
Location: 262945 - 264162 (-)
Gene ID: HRGMv2_3737_1_261
Type: TC
Location: 264155 - 264853 (-)
Type: TC
Location: 264155 - 264853 (-)
Gene ID: HRGMv2_3737_1_262
Type: pfam
Location: 264862 - 265959 (-)
Type: pfam
Location: 264862 - 265959 (-)
Gene ID: HRGMv2_3737_1_263
Type: TC
Location: 266120 - 267481 (+)
Type: TC
Location: 266120 - 267481 (+)
Gene ID: HRGMv2_3737_1_264
Type: CAZyme
Location: 267493 - 268533 (-)
Type: CAZyme
Location: 267493 - 268533 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Negativicoccaceae
Genus
Negativicoccus
Species
Negativicoccus succinicivorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.