Genome Details
Selected Rep_genome_ID: HRGMv2_3160
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Species
UMGS1601 sp900545345
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3160 | 1,869,283 | 96.47% | 0% | China | Asia | HRGM |
| MGYG000003104 | 2,017,717 | 97.15% | 1.34% | Spain | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3160_CGC2 | CGCFAM_00032 | Yes | 3 | 1 | |
| HRGMv2_3160_CGC11 | CGCFAM_00057 | Yes | 4 | 1 | |
| HRGMv2_3160_CGC9 | CGCFAM_00258 | Yes | 12 | 1 | |
| HRGMv2_3160_CGC13 | CGCFAM_00636 | Yes | 3 | 1 | |
| HRGMv2_3160_CGC1 | CGCFAM_00745 | Yes | 8 | 1 | |
| HRGMv2_3160_CGC15 | CGCFAM_01037 | Yes | 4 | 1 | |
| HRGMv2_3160_CGC8 | CGCFAM_01097 | Yes | 4 | 2 | |
| HRGMv2_3160_CGC6 | CGCFAM_01862 | Yes | 5 | 2 | |
| HRGMv2_3160_CGC7 | CGCFAM_09198 | Yes | 11 | 1 |
Top CAZyme Families