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Cluster: HRGMv2_3160_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3160_1 HRGMv2_3160_1_23 24483 24980 + 3.D.1.5.1
STP HRGMv2_3160_1 HRGMv2_3160_1_24 24980 25537 + HATPase_c
NULL(UNKNOWN) HRGMv2_3160_1 HRGMv2_3160_1_25 25562 25924 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3160_1 HRGMv2_3160_1_26 25939 27732 + 3.D.1.5.1
STP HRGMv2_3160_1 HRGMv2_3160_1_27 27746 29512 + Fer4
STP HRGMv2_3160_1 HRGMv2_3160_1_28 29605 31461 - GGDEF | Peripla_BP_3
TC HRGMv2_3160_1 HRGMv2_3160_1_29 31681 33285 - 3.A.1.121.4
CAZyme HRGMv2_3160_1 HRGMv2_3160_1_30 33437 35917 - GH94
Gene ID: HRGMv2_3160_1_23
Type: TC
Location: 24483 - 24980 (+)
Gene ID: HRGMv2_3160_1_24
Type: STP
Location: 24980 - 25537 (+)
Gene ID: HRGMv2_3160_1_25
Type:
Location: 25562 - 25924 (+)
Gene ID: HRGMv2_3160_1_26
Type: TC
Location: 25939 - 27732 (+)
Gene ID: HRGMv2_3160_1_27
Type: STP
Location: 27746 - 29512 (+)
Gene ID: HRGMv2_3160_1_28
Type: STP
Location: 29605 - 31461 (-)
Gene ID: HRGMv2_3160_1_29
Type: TC
Location: 31681 - 33285 (-)
Gene ID: HRGMv2_3160_1_30
Type: CAZyme
Location: 33437 - 35917 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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