Cluster: HRGMv2_3160_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3160
- CGC Family ID: CGCFAM_01862
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3160_12 | HRGMv2_3160_12_23 | 26955 | 28439 | + | GH77 |
| CAZyme | HRGMv2_3160_12 | HRGMv2_3160_12_24 | 28468 | 30840 | + | GT35 |
| pfam | HRGMv2_3160_12 | HRGMv2_3160_12_25 | 31112 | 32080 | + | ABC_sub_bind |
| TC | HRGMv2_3160_12 | HRGMv2_3160_12_26 | 32241 | 33167 | + | 3.A.1.34.1 |
| TC | HRGMv2_3160_12 | HRGMv2_3160_12_27 | 33160 | 33954 | + | 3.A.1.34.1 |
Gene ID: HRGMv2_3160_12_23
Type: CAZyme
Location: 26955 - 28439 (+)
Type: CAZyme
Location: 26955 - 28439 (+)
Gene ID: HRGMv2_3160_12_24
Type: CAZyme
Location: 28468 - 30840 (+)
Type: CAZyme
Location: 28468 - 30840 (+)
Gene ID: HRGMv2_3160_12_25
Type: pfam
Location: 31112 - 32080 (+)
Type: pfam
Location: 31112 - 32080 (+)
Gene ID: HRGMv2_3160_12_26
Type: TC
Location: 32241 - 33167 (+)
Type: TC
Location: 32241 - 33167 (+)
Gene ID: HRGMv2_3160_12_27
Type: TC
Location: 33160 - 33954 (+)
Type: TC
Location: 33160 - 33954 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Species
UMGS1601 sp900545345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.