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Cluster: HRGMv2_3160_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3160_22 HRGMv2_3160_22_12 7994 8758 + 3.A.1.134.4
TC HRGMv2_3160_22 HRGMv2_3160_22_13 8755 10794 + 3.A.1.134.4
pfam HRGMv2_3160_22 HRGMv2_3160_22_14 11128 11541 + ATP-synt_I
TC HRGMv2_3160_22 HRGMv2_3160_22_15 11516 12268 + 3.A.2.1.5
TC HRGMv2_3160_22 HRGMv2_3160_22_16 12360 12623 + 3.A.2.1.2
pfam HRGMv2_3160_22 HRGMv2_3160_22_17 12701 13210 + ATP-synt_B
pfam HRGMv2_3160_22 HRGMv2_3160_22_18 13210 13752 + OSCP
TC HRGMv2_3160_22 HRGMv2_3160_22_19 13811 15328 + 3.A.2.1.5
TC HRGMv2_3160_22 HRGMv2_3160_22_20 15355 16254 + 3.A.2.1.5
TC HRGMv2_3160_22 HRGMv2_3160_22_21 16226 17668 + 3.A.2.1.5
TC HRGMv2_3160_22 HRGMv2_3160_22_22 17715 18134 + 3.A.2.1.5
CAZyme HRGMv2_3160_22 HRGMv2_3160_22_23 18175 19524 - GH43_35
Gene ID: HRGMv2_3160_22_12
Type: TC
Location: 7994 - 8758 (+)
Gene ID: HRGMv2_3160_22_13
Type: TC
Location: 8755 - 10794 (+)
Gene ID: HRGMv2_3160_22_14
Type: pfam
Location: 11128 - 11541 (+)
Gene ID: HRGMv2_3160_22_15
Type: TC
Location: 11516 - 12268 (+)
Gene ID: HRGMv2_3160_22_16
Type: TC
Location: 12360 - 12623 (+)
Gene ID: HRGMv2_3160_22_17
Type: pfam
Location: 12701 - 13210 (+)
Gene ID: HRGMv2_3160_22_18
Type: pfam
Location: 13210 - 13752 (+)
Gene ID: HRGMv2_3160_22_19
Type: TC
Location: 13811 - 15328 (+)
Gene ID: HRGMv2_3160_22_20
Type: TC
Location: 15355 - 16254 (+)
Gene ID: HRGMv2_3160_22_21
Type: TC
Location: 16226 - 17668 (+)
Gene ID: HRGMv2_3160_22_22
Type: TC
Location: 17715 - 18134 (+)
Gene ID: HRGMv2_3160_22_23
Type: CAZyme
Location: 18175 - 19524 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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