Genome Details
Selected Rep_genome_ID: HRGMv2_3103
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA866
Species
UBA866 sp900543295
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR058232 | 2,348,248 | 92.89% | 2.07% | China | Asia | CGMR |
| HRGMv2_3103 | 2,579,093 | 97.98% | 0% | South Korea | Asia | HRGM |
| MGYG000001597 | 2,473,217 | 95.13% | 0.34% | China | Asia | UHGG |
| Rep_3311 | 2,365,802 | 96.0037% | 1.45414% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3103_CGC33 | CGCFAM_00006 | Yes | 8 | 4 | |
| HRGMv2_3103_CGC29 | CGCFAM_00015 | Yes | 12 | 7 | |
| HRGMv2_3103_CGC9 | CGCFAM_00070 | Yes | 3 | 1 | |
| HRGMv2_3103_CGC15 | CGCFAM_00237 | Yes | 4 | 1 | |
| HRGMv2_3103_CGC23 | CGCFAM_00362 | Yes | 3 | 1 | |
| HRGMv2_3103_CGC12 | CGCFAM_00532 | Yes | 4 | 1 | |
| HRGMv2_3103_CGC19 | CGCFAM_00910 | Yes | 5 | 1 | |
| HRGMv2_3103_CGC20 | CGCFAM_00945 | Yes | 3 | 1 | |
| HRGMv2_3103_CGC26 | CGCFAM_01636 | Yes | 5 | 2 | |
| HRGMv2_3103_CGC2 | CGCFAM_03050 | Yes | 3 | 1 | |
| HRGMv2_3103_CGC28 | CGCFAM_03127 | Yes | 3 | 1 | |
| HRGMv2_3103_CGC27 | CGCFAM_10301 | Yes | 5 | 1 |
Top CAZyme Families