Cluster: HRGMv2_3103_CGC29
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_3103
- CGC Family ID: CGCFAM_00015
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3103_10 | HRGMv2_3103_10_8 | 6185 | 7255 | - | 9.B.97.6.2 |
| TC | HRGMv2_3103_10 | HRGMv2_3103_10_9 | 7448 | 8977 | - | 2.A.66.1.40 |
| pfam | HRGMv2_3103_10 | HRGMv2_3103_10_10 | 8983 | 10026 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_3103_10 | HRGMv2_3103_10_11 | 10037 | 11005 | - | GT2 |
| CAZyme | HRGMv2_3103_10 | HRGMv2_3103_10_12 | 11002 | 12117 | - | GT4 |
| CAZyme | HRGMv2_3103_10 | HRGMv2_3103_10_13 | 12130 | 13092 | - | GT2 |
| CAZyme | HRGMv2_3103_10 | HRGMv2_3103_10_14 | 13094 | 14098 | - | GT2 |
| CAZyme | HRGMv2_3103_10 | HRGMv2_3103_10_15 | 14065 | 15165 | - | GT4 |
| pfam | HRGMv2_3103_10 | HRGMv2_3103_10_16 | 15167 | 15745 | - | Hexapep |
| NULL(UNKNOWN) | HRGMv2_3103_10 | HRGMv2_3103_10_17 | 15755 | 16855 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3103_10 | HRGMv2_3103_10_18 | 16953 | 18593 | - | GT4 |
| CAZyme | HRGMv2_3103_10 | HRGMv2_3103_10_19 | 18590 | 19675 | - | GT4 |
Gene ID: HRGMv2_3103_10_8
Type: TC
Location: 6185 - 7255 (-)
Type: TC
Location: 6185 - 7255 (-)
Gene ID: HRGMv2_3103_10_9
Type: TC
Location: 7448 - 8977 (-)
Type: TC
Location: 7448 - 8977 (-)
Gene ID: HRGMv2_3103_10_10
Type: pfam
Location: 8983 - 10026 (-)
Type: pfam
Location: 8983 - 10026 (-)
Gene ID: HRGMv2_3103_10_11
Type: CAZyme
Location: 10037 - 11005 (-)
Type: CAZyme
Location: 10037 - 11005 (-)
Gene ID: HRGMv2_3103_10_12
Type: CAZyme
Location: 11002 - 12117 (-)
Type: CAZyme
Location: 11002 - 12117 (-)
Gene ID: HRGMv2_3103_10_13
Type: CAZyme
Location: 12130 - 13092 (-)
Type: CAZyme
Location: 12130 - 13092 (-)
Gene ID: HRGMv2_3103_10_14
Type: CAZyme
Location: 13094 - 14098 (-)
Type: CAZyme
Location: 13094 - 14098 (-)
Gene ID: HRGMv2_3103_10_15
Type: CAZyme
Location: 14065 - 15165 (-)
Type: CAZyme
Location: 14065 - 15165 (-)
Gene ID: HRGMv2_3103_10_16
Type: pfam
Location: 15167 - 15745 (-)
Type: pfam
Location: 15167 - 15745 (-)
Gene ID: HRGMv2_3103_10_17
Type:
Location: 15755 - 16855 (-)
Type:
Location: 15755 - 16855 (-)
Gene ID: HRGMv2_3103_10_18
Type: CAZyme
Location: 16953 - 18593 (-)
Type: CAZyme
Location: 16953 - 18593 (-)
Gene ID: HRGMv2_3103_10_19
Type: CAZyme
Location: 18590 - 19675 (-)
Type: CAZyme
Location: 18590 - 19675 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA866
Species
UBA866 sp900543295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.