Cluster: HRGMv2_3103_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3103
- CGC Family ID: CGCFAM_00945
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3103_5 | HRGMv2_3103_5_84 | 92152 | 93738 | - | GH36 |
| TF | HRGMv2_3103_5 | HRGMv2_3103_5_85 | 93891 | 94334 | + | MarR |
| TC | HRGMv2_3103_5 | HRGMv2_3103_5_86 | 94380 | 95771 | + | 2.A.66.1.33 |
Gene ID: HRGMv2_3103_5_84
Type: CAZyme
Location: 92152 - 93738 (-)
Type: CAZyme
Location: 92152 - 93738 (-)
Gene ID: HRGMv2_3103_5_85
Type: TF
Location: 93891 - 94334 (+)
Type: TF
Location: 93891 - 94334 (+)
Gene ID: HRGMv2_3103_5_86
Type: TC
Location: 94380 - 95771 (+)
Type: TC
Location: 94380 - 95771 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA866
Species
UBA866 sp900543295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3103_5_85 | vegetarian > vegan | 2.66227 | 0.00224 |