Genome Details
Selected Rep_genome_ID: HRGMv2_2498
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2498 | 1,974,684 | 98.11% | 0.708% | Cameroon | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2498_CGC11 | CGCFAM_00094 | Yes | 5 | 1 | beta-mannan/fructan |
| HRGMv2_2498_CGC1 | CGCFAM_00405 | Yes | 7 | 2 | host glycan |
| HRGMv2_2498_CGC8 | CGCFAM_00580 | Yes | 6 | 2 | alpha-glucan |
| HRGMv2_2498_CGC4 | CGCFAM_00725 | Yes | 9 | 1 | alpha-glucan |
| HRGMv2_2498_CGC2 | CGCFAM_01693 | Yes | 4 | 2 | |
| HRGMv2_2498_CGC10 | CGCFAM_01738 | Yes | 4 | 1 | |
| HRGMv2_2498_CGC9 | CGCFAM_03092 | Yes | 3 | 1 | |
| HRGMv2_2498_CGC3 | CGCFAM_10103 | Yes | 8 | 1 | |
| HRGMv2_2498_CGC7 | CGCFAM_10104 | Yes | 8 | 1 |
Top CAZyme Families