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Cluster: HRGMv2_2498_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2498_5 HRGMv2_2498_5_2 669 2351 + 3.A.1.123.2
TC HRGMv2_2498_5 HRGMv2_2498_5_3 2614 3861 + 3.A.1.1.26
CAZyme HRGMv2_2498_5 HRGMv2_2498_5_4 4006 5709 + CBM34 | GH13_20
NULL(UNKNOWN) HRGMv2_2498_5 HRGMv2_2498_5_5 5722 5949 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2498_5 HRGMv2_2498_5_6 5976 7274 + 3.A.1.1.26
TC HRGMv2_2498_5 HRGMv2_2498_5_7 7275 8132 + 3.A.1.1.26
NULL(UNKNOWN) HRGMv2_2498_5 HRGMv2_2498_5_8 8423 9697 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2498_5 HRGMv2_2498_5_9 9773 11257 + PALP
TC HRGMv2_2498_5 HRGMv2_2498_5_10 11318 12598 + 2.A.66.1.34
Gene ID: HRGMv2_2498_5_2
Type: TC
Location: 669 - 2351 (+)
Gene ID: HRGMv2_2498_5_3
Type: TC
Location: 2614 - 3861 (+)
Gene ID: HRGMv2_2498_5_4
Type: CAZyme
Location: 4006 - 5709 (+)
Gene ID: HRGMv2_2498_5_5
Type:
Location: 5722 - 5949 (+)
Gene ID: HRGMv2_2498_5_6
Type: TC
Location: 5976 - 7274 (+)
Gene ID: HRGMv2_2498_5_7
Type: TC
Location: 7275 - 8132 (+)
Gene ID: HRGMv2_2498_5_8
Type:
Location: 8423 - 9697 (+)
Gene ID: HRGMv2_2498_5_9
Type: STP
Location: 9773 - 11257 (+)
Gene ID: HRGMv2_2498_5_10
Type: TC
Location: 11318 - 12598 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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