PROTEIN: HRGMv2_2498_5_8
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Protein File & Metadata
Source:
HRGMv2_2498_5_8.pdb
Genome ID:
Protein ID:
HRGMv2_2498_5_8
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Protein Sequence
MINVSSVELL KKRYLEKKPD LFVGIELEYP VVNLEGNTTD IEVVKELLRY LPSVLGFTIE 60 KVDDFGNPIQ LPDPVSQDTI LFEVAYTTIE ITFGRAESTQ EAEERFNFYM AMIQKKLAES 120 NHAIAGSGIH PYWEENENQS VAYLRYQMLM DYLNLSRNIT KSDLHHFPEY GAFICGSQVQ 180 LDVSRSNYLR VINVFTQIEA AKAYLFANSE FSGADWDTKI SRDIFWEESM HGIYPENIGV 240 NARLFKDEDD FFDYLNHSAI FTAERDGQTY YFYPIQARDY LATPEIHAFA LNGDEVNIYP 300 QEKDFETHRS YQCQDLTTRG TVEFRSVCTQ PLNRTFTSAT FQLGLLVHLD KLEAYLETAP 360 FFKVFVRNYK FLRRQFSKKK LTDEEETAII EFSKDLLLLA DEGLKMRNKQ ETTYLQPLKE 420 ELGL 424
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CY80-F1-model_v4 | 3 | 424 | 1 | 425 | 0.9889 |
0.998 |
| AF-Q688Q9-F1-model_v4 | 1 | 424 | 56 | 463 | 0.7614 |
0.8617 |
| AF-Q6Z3A3-F1-model_v4 | 1 | 424 | 60 | 467 | 0.7585 |
0.8614 |
| AF-I1K6J1-F1-model_v4 | 1 | 424 | 68 | 475 | 0.755 |
0.8632 |
| AF-A0A0R0IL99-F1-model_v4 | 1 | 424 | 74 | 481 | 0.7512 |
0.8631 |
| AF-K0EZF9-F1-model_v4 | 1 | 424 | 19 | 428 | 0.7508 |
0.8155 |
| AF-P9WPK7-F1-model_v4 | 1 | 424 | 23 | 403 | 0.748 |
0.8526 |
| AF-K7K578-F1-model_v4 | 1 | 424 | 70 | 477 | 0.7473 |
0.8562 |
| AF-A0A1D6FV28-F1-model_v4 | 1 | 424 | 64 | 486 | 0.7464 |
0.8328 |
| AF-P46309-F1-model_v4 | 2 | 424 | 86 | 493 | 0.742 |
0.8608 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6gmo-assembly2.cif.gz_B | 1 | 424 | 1 | 409 | 0.7954 |
0.8541 |
| 1r8g-assembly1.cif.gz_B | 9 | 424 | 1 | 328 | 0.7049 |
0.8438 |
| 1tt4-assembly1.cif.gz_B | 15 | 424 | 1 | 324 | 0.6992 |
0.8418 |
| 1r8g-assembly1.cif.gz_A | 12 | 424 | 1 | 322 | 0.6956 |
0.84 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q688Q9-F1-model_v4 | 1 | 424 | 56 | 463 | 0.7614 |
0.8617 |
| AF-Q8GU95-F1-model_v4 | 1 | 424 | 56 | 463 | 0.7612 |
0.8614 |
| AF-A2YL07-F1-model_v4 | 1 | 424 | 60 | 467 | 0.7592 |
0.8621 |
| AF-Q6Z3A3-F1-model_v4 | 1 | 424 | 60 | 467 | 0.7585 |
0.8614 |
| AF-A0R5N1-F1-model_v4 | 1 | 424 | 17 | 394 | 0.7546 |
0.8581 |
| AF-Q9ZNX6-F1-model_v4 | 1 | 424 | 72 | 479 | 0.752 |
0.8627 |
| AF-P9WPK7-F1-model_v4 | 1 | 424 | 23 | 403 | 0.748 |
0.8526 |
| AF-O23736-F1-model_v4 | 1 | 424 | 78 | 485 | 0.7479 |
0.8622 |
| AF-P9WPK6-F1-model_v4 | 1 | 424 | 23 | 403 | 0.7478 |
0.8524 |
| AF-Q1W2L8-F1-model_v4 | 1 | 424 | 85 | 493 | 0.7428 |
0.86 |