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Cluster: HRGMv2_2498_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2498_4 HRGMv2_2498_4_38 36190 36834 - 9.B.28.1.4
pfam HRGMv2_2498_4 HRGMv2_2498_4_39 36854 37306 - DUF386
TC HRGMv2_2498_4 HRGMv2_2498_4_40 37796 38635 - 3.A.1.1.34
TC HRGMv2_2498_4 HRGMv2_2498_4_41 38651 39538 - 3.A.1.1.20
STP HRGMv2_2498_4 HRGMv2_2498_4_42 39736 41064 - SBP_bac_1
NULL(UNKNOWN) HRGMv2_2498_4 HRGMv2_2498_4_43 41136 41351 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2498_4 HRGMv2_2498_4_44 41317 44478 - CBM32 | CBM51
TC HRGMv2_2498_4 HRGMv2_2498_4_45 44734 46251 - 4.A.1.1.9
Gene ID: HRGMv2_2498_4_38
Type: TC
Location: 36190 - 36834 (-)
Gene ID: HRGMv2_2498_4_39
Type: pfam
Location: 36854 - 37306 (-)
Gene ID: HRGMv2_2498_4_40
Type: TC
Location: 37796 - 38635 (-)
Gene ID: HRGMv2_2498_4_41
Type: TC
Location: 38651 - 39538 (-)
Gene ID: HRGMv2_2498_4_42
Type: STP
Location: 39736 - 41064 (-)
Gene ID: HRGMv2_2498_4_43
Type:
Location: 41136 - 41351 (-)
Gene ID: HRGMv2_2498_4_44
Type: CAZyme
Location: 41317 - 44478 (-)
Gene ID: HRGMv2_2498_4_45
Type: TC
Location: 44734 - 46251 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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