Genome Details
Selected Rep_genome_ID: HRGMv2_1819
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia rettgeri
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1819 | 4,410,161 | 98.9% | 1.621% | UK | Europe | HRGM |
| MGYG000004295 | 4,142,275 | 98.49% | 2.16% | Israel | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1819_CGC9 | CGCFAM_00205 | Yes | 7 | 1 | |
| HRGMv2_1819_CGC22 | CGCFAM_00293 | Yes | 9 | 2 | |
| HRGMv2_1819_CGC27 | CGCFAM_00399 | Yes | 7 | 1 | |
| HRGMv2_1819_CGC21 | CGCFAM_00432 | Yes | 4 | 1 | |
| HRGMv2_1819_CGC3 | CGCFAM_00914 | Yes | 3 | 1 | |
| HRGMv2_1819_CGC18 | CGCFAM_07654 | Yes | 3 | 1 | |
| HRGMv2_1819_CGC14 | CGCFAM_08330 | Yes | 8 | 1 | |
| HRGMv2_1819_CGC10 | CGCFAM_08331 | Yes | 5 | 1 | |
| HRGMv2_1819_CGC15 | CGCFAM_09877 | Yes | 12 | 1 | |
| HRGMv2_1819_CGC29 | CGCFAM_09878 | Yes | 4 | 1 |
Top CAZyme Families