Cluster: HRGMv2_1819_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1819
- CGC Family ID: CGCFAM_08331
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1819_8 | HRGMv2_1819_8_63 | 82827 | 84515 | - | GT83 |
| TC | HRGMv2_1819_8 | HRGMv2_1819_8_64 | 85129 | 86475 | + | 2.A.40.7.7 |
| NULL(UNKNOWN) | HRGMv2_1819_8 | HRGMv2_1819_8_65 | 86617 | 86718 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1819_8 | HRGMv2_1819_8_66 | 86739 | 88388 | + | 2.A.36.3.1 |
| TC | HRGMv2_1819_8 | HRGMv2_1819_8_67 | 88446 | 89345 | + | 2.A.7.3.61 |
Gene ID: HRGMv2_1819_8_63
Type: CAZyme
Location: 82827 - 84515 (-)
Type: CAZyme
Location: 82827 - 84515 (-)
Gene ID: HRGMv2_1819_8_64
Type: TC
Location: 85129 - 86475 (+)
Type: TC
Location: 85129 - 86475 (+)
Gene ID: HRGMv2_1819_8_65
Type:
Location: 86617 - 86718 (+)
Type:
Location: 86617 - 86718 (+)
Gene ID: HRGMv2_1819_8_66
Type: TC
Location: 86739 - 88388 (+)
Type: TC
Location: 86739 - 88388 (+)
Gene ID: HRGMv2_1819_8_67
Type: TC
Location: 88446 - 89345 (+)
Type: TC
Location: 88446 - 89345 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia rettgeri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.