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Cluster: HRGMv2_1819_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1819_32 HRGMv2_1819_32_19 19209 19526 - 8.A.2.1.3
CAZyme HRGMv2_1819_32 HRGMv2_1819_32_20 19797 21428 + AA1
STP HRGMv2_1819_32 HRGMv2_1819_32_21 21555 22091 + Pribosyltran
TC HRGMv2_1819_32 HRGMv2_1819_32_22 22164 26315 - 1.C.75.1.2
TC HRGMv2_1819_32 HRGMv2_1819_32_23 26753 27406 - 2.A.53.3.8
TC HRGMv2_1819_32 HRGMv2_1819_32_24 27664 28605 + 3.A.1.105.17
TC HRGMv2_1819_32 HRGMv2_1819_32_25 28602 29372 + 3.A.1.105.17
Gene ID: HRGMv2_1819_32_19
Type: TC
Location: 19209 - 19526 (-)
Gene ID: HRGMv2_1819_32_20
Type: CAZyme
Location: 19797 - 21428 (+)
Gene ID: HRGMv2_1819_32_21
Type: STP
Location: 21555 - 22091 (+)
Gene ID: HRGMv2_1819_32_22
Type: TC
Location: 22164 - 26315 (-)
Gene ID: HRGMv2_1819_32_23
Type: TC
Location: 26753 - 27406 (-)
Gene ID: HRGMv2_1819_32_24
Type: TC
Location: 27664 - 28605 (+)
Gene ID: HRGMv2_1819_32_25
Type: TC
Location: 28602 - 29372 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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