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Cluster: HRGMv2_1819_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1819_23 HRGMv2_1819_23_58 50275 51195 - GH18
NULL(UNKNOWN) HRGMv2_1819_23 HRGMv2_1819_23_59 51910 52269 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1819_23 HRGMv2_1819_23_60 52320 54362 - 2.A.15.1.4
STP HRGMv2_1819_23 HRGMv2_1819_23_61 54548 55174 + TetR_N
sulfatase HRGMv2_1819_23 HRGMv2_1819_23_62 55197 56675 + S1_6
CAZyme HRGMv2_1819_23 HRGMv2_1819_23_63 56715 58394 + AA3_2
pfam HRGMv2_1819_23 HRGMv2_1819_23_64 58764 61019 + TonB_dep_Rec_b-barrel | Plug
pfam HRGMv2_1819_23 HRGMv2_1819_23_65 61371 61718 - CutA1
TC HRGMv2_1819_23 HRGMv2_1819_23_66 62358 63830 + 2.A.47.3.1
Gene ID: HRGMv2_1819_23_58
Type: CAZyme
Location: 50275 - 51195 (-)
Gene ID: HRGMv2_1819_23_59
Type:
Location: 51910 - 52269 (+)
Gene ID: HRGMv2_1819_23_60
Type: TC
Location: 52320 - 54362 (-)
Gene ID: HRGMv2_1819_23_61
Type: STP
Location: 54548 - 55174 (+)
Gene ID: HRGMv2_1819_23_62
Type: sulfatase
Location: 55197 - 56675 (+)
Gene ID: HRGMv2_1819_23_63
Type: CAZyme
Location: 56715 - 58394 (+)
Gene ID: HRGMv2_1819_23_64
Type: pfam
Location: 58764 - 61019 (+)
Gene ID: HRGMv2_1819_23_65
Type: pfam
Location: 61371 - 61718 (-)
Gene ID: HRGMv2_1819_23_66
Type: TC
Location: 62358 - 63830 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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