Genome Details
Selected Rep_genome_ID: HRGMv2_1806
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Hafnia
Species
Hafnia protea
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1806 | 4,179,267 | 94.31% | 0.625% | South Korea | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1806_CGC3 | CGCFAM_00218 | Yes | 5 | 1 | chitin |
| HRGMv2_1806_CGC25 | CGCFAM_00432 | Yes | 6 | 1 | |
| HRGMv2_1806_CGC5 | CGCFAM_00447 | Yes | 5 | 1 | |
| HRGMv2_1806_CGC20 | CGCFAM_00565 | Yes | 7 | 2 | |
| HRGMv2_1806_CGC1 | CGCFAM_00698 | Yes | 13 | 9 | |
| HRGMv2_1806_CGC24 | CGCFAM_00733 | Yes | 3 | 1 | |
| HRGMv2_1806_CGC17 | CGCFAM_00786 | Yes | 4 | 1 | |
| HRGMv2_1806_CGC16 | CGCFAM_01182 | Yes | 6 | 1 | |
| HRGMv2_1806_CGC26 | CGCFAM_03291 | Yes | 5 | 2 | |
| HRGMv2_1806_CGC33 | CGCFAM_03301 | Yes | 3 | 1 | |
| HRGMv2_1806_CGC32 | CGCFAM_07201 | Yes | 3 | 1 | |
| HRGMv2_1806_CGC37 | CGCFAM_08467 | Yes | 3 | 1 | |
| HRGMv2_1806_CGC34 | CGCFAM_08986 | Yes | 4 | 1 | |
| HRGMv2_1806_CGC15 | CGCFAM_09866 | Yes | 11 | 1 | |
| HRGMv2_1806_CGC21 | CGCFAM_09867 | Yes | 5 | 1 | |
| HRGMv2_1806_CGC28 | CGCFAM_09868 | Yes | 4 | 1 | |
| HRGMv2_1806_CGC6 | CGCFAM_09869 | Yes | 12 | 1 |
Top CAZyme Families