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Cluster: HRGMv2_1806_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1806_27 HRGMv2_1806_27_1 107 616 + 4.A.3.2.5
STP HRGMv2_1806_27 HRGMv2_1806_27_2 720 1574 - PALP
TC HRGMv2_1806_27 HRGMv2_1806_27_3 1689 2783 - 3.A.1.6.1
TC HRGMv2_1806_27 HRGMv2_1806_27_4 2780 3658 - 3.A.1.6.1
TC HRGMv2_1806_27 HRGMv2_1806_27_5 3658 4497 - 3.A.1.6.1
TC HRGMv2_1806_27 HRGMv2_1806_27_6 4497 5501 - 3.A.1.6.1
pfam HRGMv2_1806_27 HRGMv2_1806_27_7 5722 6621 - Dyp_perox_N | Dyp_perox_C
pfam HRGMv2_1806_27 HRGMv2_1806_27_8 6962 7546 - DUF1131
TC HRGMv2_1806_27 HRGMv2_1806_27_9 7675 8142 - 9.B.127.1.1
pfam HRGMv2_1806_27 HRGMv2_1806_27_10 8224 8649 - Acetyltransf_1 | FR47 | Acetyltransf_6 | Acetyltransf_7 | Acetyltransf_10
CAZyme HRGMv2_1806_27 HRGMv2_1806_27_11 8741 11857 - GH2
Gene ID: HRGMv2_1806_27_1
Type: TC
Location: 107 - 616 (+)
Gene ID: HRGMv2_1806_27_2
Type: STP
Location: 720 - 1574 (-)
Gene ID: HRGMv2_1806_27_3
Type: TC
Location: 1689 - 2783 (-)
Gene ID: HRGMv2_1806_27_4
Type: TC
Location: 2780 - 3658 (-)
Gene ID: HRGMv2_1806_27_5
Type: TC
Location: 3658 - 4497 (-)
Gene ID: HRGMv2_1806_27_6
Type: TC
Location: 4497 - 5501 (-)
Gene ID: HRGMv2_1806_27_7
Type: pfam
Location: 5722 - 6621 (-)
Gene ID: HRGMv2_1806_27_8
Type: pfam
Location: 6962 - 7546 (-)
Gene ID: HRGMv2_1806_27_9
Type: TC
Location: 7675 - 8142 (-)
Gene ID: HRGMv2_1806_27_10
Type: pfam
Location: 8224 - 8649 (-)
Gene ID: HRGMv2_1806_27_11
Type: CAZyme
Location: 8741 - 11857 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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