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Cluster: HRGMv2_1806_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1806_5 HRGMv2_1806_5_36 37078 37989 - 2.A.7.17.1
TC HRGMv2_1806_5 HRGMv2_1806_5_37 38465 39331 + 1.A.30.2.1
TC HRGMv2_1806_5 HRGMv2_1806_5_38 39336 39770 + 1.A.30.2.1
pfam HRGMv2_1806_5 HRGMv2_1806_5_39 39848 40729 + Cofac_haem_bdg
TC HRGMv2_1806_5 HRGMv2_1806_5_40 40740 41522 + 2.C.1.1.3
peptidase HRGMv2_1806_5 HRGMv2_1806_5_41 41616 43757 + S09.UPA
TC HRGMv2_1806_5 HRGMv2_1806_5_42 43811 46075 + 1.B.14.7.1
TC HRGMv2_1806_5 HRGMv2_1806_5_43 46143 46502 - 2.A.7.26.1
TC HRGMv2_1806_5 HRGMv2_1806_5_44 46747 48318 + 4.A.1.1.8
CAZyme HRGMv2_1806_5 HRGMv2_1806_5_45 48332 49711 + GH4
TF HRGMv2_1806_5 HRGMv2_1806_5_46 49932 50480 - HTH_6
TC HRGMv2_1806_5 HRGMv2_1806_5_47 50580 51767 + 2.A.1.7.11
Gene ID: HRGMv2_1806_5_36
Type: TC
Location: 37078 - 37989 (-)
Gene ID: HRGMv2_1806_5_37
Type: TC
Location: 38465 - 39331 (+)
Gene ID: HRGMv2_1806_5_38
Type: TC
Location: 39336 - 39770 (+)
Gene ID: HRGMv2_1806_5_39
Type: pfam
Location: 39848 - 40729 (+)
Gene ID: HRGMv2_1806_5_40
Type: TC
Location: 40740 - 41522 (+)
Gene ID: HRGMv2_1806_5_41
Type: peptidase
Location: 41616 - 43757 (+)
Gene ID: HRGMv2_1806_5_42
Type: TC
Location: 43811 - 46075 (+)
Gene ID: HRGMv2_1806_5_43
Type: TC
Location: 46143 - 46502 (-)
Gene ID: HRGMv2_1806_5_44
Type: TC
Location: 46747 - 48318 (+)
Gene ID: HRGMv2_1806_5_45
Type: CAZyme
Location: 48332 - 49711 (+)
Gene ID: HRGMv2_1806_5_46
Type: TF
Location: 49932 - 50480 (-)
Gene ID: HRGMv2_1806_5_47
Type: TC
Location: 50580 - 51767 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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