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Genome Details

Selected Rep_genome_ID: HRGMv2_1788
Total Genomes Found: 47
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Gammaproteobacteria
→
Order
Enterobacterales
→
Family
Succinivibrionaceae
→
Genus
Succinivibrio
→
Species
Succinivibrio sp000431835
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR029650 2,316,572 98.24% 0.29% China Asia CGMR
GCA_021614875.1_ASM2161487v1_genomic 2,595,846 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021616055.1_ASM2161605v1_genomic 2,225,337 98.79% 0.29% NA Africa H3AfricaPhase1
GCA_021616375.1_ASM2161637v1_genomic 2,418,546 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021616795.1_ASM2161679v1_genomic 2,099,674 91.29% 0.29% NA Africa H3AfricaPhase1
GCA_021617655.1_ASM2161765v1_genomic 2,336,003 99.18% 0.29% NA Africa H3AfricaPhase1
GCA_021618625.1_ASM2161862v1_genomic 2,293,560 98.79% 0.29% NA Africa H3AfricaPhase1
GCA_021619425.1_ASM2161942v1_genomic 2,071,131 94.67% 0.29% NA Africa H3AfricaPhase1
GCA_021619465.1_ASM2161946v1_genomic 2,339,579 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021619565.1_ASM2161956v1_genomic 2,276,608 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021619925.1_ASM2161992v1_genomic 2,226,318 97.61% 0.88% NA Africa H3AfricaPhase1
GCA_021619995.1_ASM2161999v1_genomic 1,912,428 93.2% 0.92% NA Africa H3AfricaPhase1
GCA_021620265.1_ASM2162026v1_genomic 2,353,444 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021621755.1_ASM2162175v1_genomic 2,291,399 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021623865.1_ASM2162386v1_genomic 2,417,486 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021623945.1_ASM2162394v1_genomic 2,262,407 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021624935.1_ASM2162493v1_genomic 2,302,892 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021625185.1_ASM2162518v1_genomic 2,256,162 97.03% 0.29% NA Africa H3AfricaPhase1
GCA_021626595.1_ASM2162659v1_genomic 2,781,721 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021627145.1_ASM2162714v1_genomic 2,563,222 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021627505.1_ASM2162750v1_genomic 2,374,814 99.38% 0.88% NA Africa H3AfricaPhase1
GCA_021628445.1_ASM2162844v1_genomic 2,297,471 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021629515.1_ASM2162951v1_genomic 2,394,402 98.24% 0.29% NA Africa H3AfricaPhase1
GCA_021629605.1_ASM2162960v1_genomic 2,571,024 98.2% 4.41% NA Africa H3AfricaPhase1
GCA_021630325.1_ASM2163032v1_genomic 2,337,772 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021630965.1_ASM2163096v1_genomic 2,456,964 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021631515.1_ASM2163151v1_genomic 2,494,782 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021631925.1_ASM2163192v1_genomic 2,429,859 99.38% 0.88% NA Africa H3AfricaPhase1
GCA_021633125.1_ASM2163312v1_genomic 2,413,168 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021633595.1_ASM2163359v1_genomic 2,436,754 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021635045.1_ASM2163504v1_genomic 2,298,669 99.18% 1.4% NA Africa H3AfricaPhase1
GCA_021636025.1_ASM2163602v1_genomic 2,329,685 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021637345.1_ASM2163734v1_genomic 2,347,006 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021637925.1_ASM2163792v1_genomic 2,202,713 98.79% 0.29% NA Africa H3AfricaPhase1
GCA_021638205.1_ASM2163820v1_genomic 2,273,774 98.79% 0.29% NA Africa H3AfricaPhase1
GCA_021639405.1_ASM2163940v1_genomic 2,381,597 98.79% 0.88% NA Africa H3AfricaPhase1
GCA_021639985.1_ASM2163998v1_genomic 2,419,274 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021640815.1_ASM2164081v1_genomic 2,530,639 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021641105.1_ASM2164110v1_genomic 2,405,987 99.38% 0.29% NA Africa H3AfricaPhase1
GCA_021641275.1_ASM2164127v1_genomic 2,298,530 99.38% 0.29% NA Africa H3AfricaPhase1
HRGMv2_1788 2,426,035 99.37% 0.294% NA NA HRGM
MGYG000000412 2,387,553 99.38% 0.29% Sweden Europe UHGG
REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_D_9_CHE0010BZ.70 2,334,509 99.38% 0.29% NA Africa Hadza
Rep_1011 2,460,600 99.3791% 0.882353% NA NA WIS
ShaoY_2019_ERR3405747_bin.1 2,308,497 99.37% 0.294% UK Europe ELGG
SPMP48_bin.94 2,112,018 96.76% 0.29% Singapore Asia SPMP
SW052_61 2,391,858 99.38% 0.29% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_1788_CGC12 CGCFAM_00070 Yes 3 1
HRGMv2_1788_CGC13 CGCFAM_00593 Yes 4 2
HRGMv2_1788_CGC2 CGCFAM_00614 Yes 4 1
HRGMv2_1788_CGC5 CGCFAM_00827 Yes 15 2 galactan
HRGMv2_1788_CGC14 CGCFAM_01210 Yes 5 2
HRGMv2_1788_CGC20 CGCFAM_01211 Yes 12 1
HRGMv2_1788_CGC9 CGCFAM_07791 Yes 15 2
Top CAZyme Families