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Genome Details

Selected Rep_genome_ID: HRGMv2_1753
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Gammaproteobacteria
→
Order
Enterobacterales
→
Family
Pasteurellaceae
→
Genus
Haemophilus_D
→
Species
Haemophilus_D sp014931275
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR089558 1,840,248 93.35% 1.57% China Asia CGMR
HRGMv2_1753 1,971,210 99.88% 0.022% UK Europe HRGM
Rep_924 2,146,925 98.1742% 2.48485% NA NA WIS
ShaoY_2019_ERR3405006_bin.2 1,953,453 99.65% 0.909% UK Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_1753_CGC14 CGCFAM_00036 Yes 10 4
HRGMv2_1753_CGC21 CGCFAM_01408 Yes 8 2
HRGMv2_1753_CGC3 CGCFAM_01473 Yes 13 5
HRGMv2_1753_CGC22 CGCFAM_03481 Yes 7 1
Top CAZyme Families