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Cluster: HRGMv2_1753_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1753_7 HRGMv2_1753_7_56 52825 54240 - 9.B.18.1.2
CAZyme HRGMv2_1753_7 HRGMv2_1753_7_57 54251 55015 - GT111
CAZyme HRGMv2_1753_7 HRGMv2_1753_7_58 55012 55941 - GT2
NULL(UNKNOWN) HRGMv2_1753_7 HRGMv2_1753_7_59 56002 57720 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1753_7 HRGMv2_1753_7_60 57748 58128 - GtrA_DPMS_TM
CAZyme HRGMv2_1753_7 HRGMv2_1753_7_61 58136 59050 - GT2
pfam HRGMv2_1753_7 HRGMv2_1753_7_62 59085 60236 - Amino_oxidase | GLF | NAD_binding_8
CAZyme HRGMv2_1753_7 HRGMv2_1753_7_63 60250 62007 - GT2
TC HRGMv2_1753_7 HRGMv2_1753_7_64 62022 62753 - 3.A.1.103.1
TC HRGMv2_1753_7 HRGMv2_1753_7_65 62753 63544 - 3.A.1.103.4
Gene ID: HRGMv2_1753_7_56
Type: TC
Location: 52825 - 54240 (-)
Gene ID: HRGMv2_1753_7_57
Type: CAZyme
Location: 54251 - 55015 (-)
Gene ID: HRGMv2_1753_7_58
Type: CAZyme
Location: 55012 - 55941 (-)
Gene ID: HRGMv2_1753_7_59
Type:
Location: 56002 - 57720 (-)
Gene ID: HRGMv2_1753_7_60
Type: pfam
Location: 57748 - 58128 (-)
Gene ID: HRGMv2_1753_7_61
Type: CAZyme
Location: 58136 - 59050 (-)
Gene ID: HRGMv2_1753_7_62
Type: pfam
Location: 59085 - 60236 (-)
Gene ID: HRGMv2_1753_7_63
Type: CAZyme
Location: 60250 - 62007 (-)
Gene ID: HRGMv2_1753_7_64
Type: TC
Location: 62022 - 62753 (-)
Gene ID: HRGMv2_1753_7_65
Type: TC
Location: 62753 - 63544 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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