Genome Details
Selected Rep_genome_ID: HRGMv2_1726
Total Genomes Found: 8
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio piger
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG435_bin.40 | 2,392,957 | 95.67% | 0.12% | NA | Africa | H3AfricaPhase2 |
| C171.CMAG_3 | 2,902,798 | 99.29% | 0.59% | China(Inner Mongolia) | Asia | IMGG |
| CGMR002233 | 2,471,705 | 99.29% | 1.18% | China | Asia | CGMR |
| CGMR071651 | 2,514,363 | 97.81% | 0.3% | China | Asia | CGMR |
| HRGMv2_1726 | 2,638,531 | 98.61% | 0.032% | UK | Europe | HRGM |
| Rep_2740 | 2,879,493 | 97.14% | 0% | NA | NA | WIS |
| SPMP71_bin.83 | 2,697,584 | 93.01% | 0.59% | Singapore | Asia | SPMP |
| SW130_70 | 2,752,461 | 99.88% | 0.59% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1726_CGC8 | CGCFAM_00919 | Yes | 5 | 1 | |
| HRGMv2_1726_CGC7 | CGCFAM_01045 | Yes | 7 | 1 | |
| HRGMv2_1726_CGC2 | CGCFAM_01452 | Yes | 9 | 2 | |
| HRGMv2_1726_CGC10 | CGCFAM_02315 | Yes | 7 | 4 | |
| HRGMv2_1726_CGC4 | CGCFAM_04582 | Yes | 9 | 1 | |
| HRGMv2_1726_CGC1 | CGCFAM_09848 | Yes | 10 | 2 |
Top CAZyme Families