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Cluster: HRGMv2_1726_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1726_10 HRGMv2_1726_10_19 19288 21750 + GT51
pfam HRGMv2_1726_10 HRGMv2_1726_10_20 22042 22938 + PCMT | GCD14
NULL(UNKNOWN) HRGMv2_1726_10 HRGMv2_1726_10_21 22781 23365 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1726_10 HRGMv2_1726_10_22 23479 25839 - 3.A.3.5.15
STP HRGMv2_1726_10 HRGMv2_1726_10_23 25952 26149 + HMA
pfam HRGMv2_1726_10 HRGMv2_1726_10_24 26367 27359 + NAD_Gly3P_dh_N | NAD_Gly3P_dh_C | GPD_NAD_C_bact
TC HRGMv2_1726_10 HRGMv2_1726_10_25 27538 31323 + 3.D.1.4.3
TC HRGMv2_1726_10 HRGMv2_1726_10_26 31339 32301 + 3.D.1.4.3
TC HRGMv2_1726_10 HRGMv2_1726_10_27 32313 32762 + 3.D.1.4.3
Gene ID: HRGMv2_1726_10_19
Type: CAZyme
Location: 19288 - 21750 (+)
Gene ID: HRGMv2_1726_10_20
Type: pfam
Location: 22042 - 22938 (+)
Gene ID: HRGMv2_1726_10_21
Type:
Location: 22781 - 23365 (-)
Gene ID: HRGMv2_1726_10_22
Type: TC
Location: 23479 - 25839 (-)
Gene ID: HRGMv2_1726_10_23
Type: STP
Location: 25952 - 26149 (+)
Gene ID: HRGMv2_1726_10_24
Type: pfam
Location: 26367 - 27359 (+)
Gene ID: HRGMv2_1726_10_25
Type: TC
Location: 27538 - 31323 (+)
Gene ID: HRGMv2_1726_10_26
Type: TC
Location: 31339 - 32301 (+)
Gene ID: HRGMv2_1726_10_27
Type: TC
Location: 32313 - 32762 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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