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Cluster: HRGMv2_1726_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1726_47 HRGMv2_1726_47_3 1550 2611 + GT2
pfam HRGMv2_1726_47 HRGMv2_1726_47_4 2915 3334 + ATP-synt_B
pfam HRGMv2_1726_47 HRGMv2_1726_47_5 3483 4028 + ATP-synt_B
TC HRGMv2_1726_47 HRGMv2_1726_47_6 4025 4576 + 3.A.2.1.2
TC HRGMv2_1726_47 HRGMv2_1726_47_7 4580 6088 + 3.A.2.1.2
TC HRGMv2_1726_47 HRGMv2_1726_47_8 6106 6987 + 3.A.2.1.7
TC HRGMv2_1726_47 HRGMv2_1726_47_9 7000 8421 + 3.A.2.1.3
Gene ID: HRGMv2_1726_47_3
Type: CAZyme
Location: 1550 - 2611 (+)
Gene ID: HRGMv2_1726_47_4
Type: pfam
Location: 2915 - 3334 (+)
Gene ID: HRGMv2_1726_47_5
Type: pfam
Location: 3483 - 4028 (+)
Gene ID: HRGMv2_1726_47_6
Type: TC
Location: 4025 - 4576 (+)
Gene ID: HRGMv2_1726_47_7
Type: TC
Location: 4580 - 6088 (+)
Gene ID: HRGMv2_1726_47_8
Type: TC
Location: 6106 - 6987 (+)
Gene ID: HRGMv2_1726_47_9
Type: TC
Location: 7000 - 8421 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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