Genome Details
Selected Rep_genome_ID: HRGMv2_0469
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900549175
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0469 | 3,395,981 | 97.01% | 0.37% | China | Asia | HRGM |
| MGYG000000853 | 3,157,276 | 90.78% | 1.6% | China | Asia | UHGG |
| Rep_174 | 3,100,859 | 93.8197% | 0.185874% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0469_CGC26 | CGCFAM_00029 | Yes | 5 | 1 | |
| HRGMv2_0469_CGC17 | CGCFAM_00033 | Yes | 3 | 1 | |
| HRGMv2_0469_CGC18 | CGCFAM_00034 | Yes | 13 | 6 | |
| HRGMv2_0469_CGC35 | CGCFAM_00048 | Yes | 6 | 2 | |
| HRGMv2_0469_CGC4 | CGCFAM_00068 | Yes | 6 | 3 | |
| HRGMv2_0469_CGC15 | CGCFAM_00083 | Yes | 7 | 3 | beta-glucan |
| HRGMv2_0469_CGC14 | CGCFAM_00180 | Yes | 8 | 4 | |
| HRGMv2_0469_CGC32 | CGCFAM_00437 | Yes | 8 | 1 | |
| HRGMv2_0469_CGC28 | CGCFAM_00830 | Yes | 3 | 1 | pectin |
| HRGMv2_0469_CGC40 | CGCFAM_00839 | Yes | 6 | 1 | |
| HRGMv2_0469_CGC22 | CGCFAM_01255 | Yes | 4 | 1 | |
| HRGMv2_0469_CGC34 | CGCFAM_01363 | Yes | 9 | 1 | |
| HRGMv2_0469_CGC9 | CGCFAM_01495 | Yes | 6 | 4 | |
| HRGMv2_0469_CGC30 | CGCFAM_01606 | Yes | 3 | 1 | |
| HRGMv2_0469_CGC12 | CGCFAM_02466 | Yes | 4 | 1 | |
| HRGMv2_0469_CGC41 | CGCFAM_02553 | Yes | 5 | 2 | |
| HRGMv2_0469_CGC23 | CGCFAM_02668 | Yes | 5 | 2 | |
| HRGMv2_0469_CGC20 | CGCFAM_04837 | Yes | 3 | 1 | |
| HRGMv2_0469_CGC1 | CGCFAM_09650 | Yes | 8 | 1 | |
| HRGMv2_0469_CGC10 | CGCFAM_09688 | Yes | 4 | 3 | |
| HRGMv2_0469_CGC13 | CGCFAM_09689 | Yes | 3 | 1 | |
| HRGMv2_0469_CGC38 | CGCFAM_09690 | Yes | 4 | 2 |
Top CAZyme Families