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Cluster: HRGMv2_0469_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0469_57 HRGMv2_0469_57_11 8252 9517 - 3.D.5.1.1
TC HRGMv2_0469_57 HRGMv2_0469_57_12 9538 10164 - 3.D.5.1.1
TC HRGMv2_0469_57 HRGMv2_0469_57_13 10168 10794 - 3.D.5.1.1
pfam HRGMv2_0469_57 HRGMv2_0469_57_14 10810 11544 - FMN_bind
TC HRGMv2_0469_57 HRGMv2_0469_57_15 11555 12715 - 3.D.5.1.1
pfam HRGMv2_0469_57 HRGMv2_0469_57_16 12728 14077 - NQRA_N | NQRA_SLBB | NQRA_2nd
pfam HRGMv2_0469_57 HRGMv2_0469_57_17 14353 18675 + TamB
CAZyme HRGMv2_0469_57 HRGMv2_0469_57_18 18867 21278 - GH2
Gene ID: HRGMv2_0469_57_11
Type: TC
Location: 8252 - 9517 (-)
Gene ID: HRGMv2_0469_57_12
Type: TC
Location: 9538 - 10164 (-)
Gene ID: HRGMv2_0469_57_13
Type: TC
Location: 10168 - 10794 (-)
Gene ID: HRGMv2_0469_57_14
Type: pfam
Location: 10810 - 11544 (-)
Gene ID: HRGMv2_0469_57_15
Type: TC
Location: 11555 - 12715 (-)
Gene ID: HRGMv2_0469_57_16
Type: pfam
Location: 12728 - 14077 (-)
Gene ID: HRGMv2_0469_57_17
Type: pfam
Location: 14353 - 18675 (+)
Gene ID: HRGMv2_0469_57_18
Type: CAZyme
Location: 18867 - 21278 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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