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Cluster: HRGMv2_0469_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0469_14 HRGMv2_0469_14_23 27830 29686 + 3.A.1.106.1
pfam HRGMv2_0469_14 HRGMv2_0469_14_24 29691 30617 + Lip_A_acyltrans
pfam HRGMv2_0469_14 HRGMv2_0469_14_25 30752 31804 - Acyl_transf_3
CAZyme HRGMv2_0469_14 HRGMv2_0469_14_26 31951 32772 + GT11
pfam HRGMv2_0469_14 HRGMv2_0469_14_27 32778 34556 - Sulfatase
CAZyme HRGMv2_0469_14 HRGMv2_0469_14_28 34546 35649 - GT4
CAZyme HRGMv2_0469_14 HRGMv2_0469_14_29 35646 36404 - GT2
CAZyme HRGMv2_0469_14 HRGMv2_0469_14_30 36444 37166 - GT25
Gene ID: HRGMv2_0469_14_23
Type: TC
Location: 27830 - 29686 (+)
Gene ID: HRGMv2_0469_14_24
Type: pfam
Location: 29691 - 30617 (+)
Gene ID: HRGMv2_0469_14_25
Type: pfam
Location: 30752 - 31804 (-)
Gene ID: HRGMv2_0469_14_26
Type: CAZyme
Location: 31951 - 32772 (+)
Gene ID: HRGMv2_0469_14_27
Type: pfam
Location: 32778 - 34556 (-)
Gene ID: HRGMv2_0469_14_28
Type: CAZyme
Location: 34546 - 35649 (-)
Gene ID: HRGMv2_0469_14_29
Type: CAZyme
Location: 35646 - 36404 (-)
Gene ID: HRGMv2_0469_14_30
Type: CAZyme
Location: 36444 - 37166 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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