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Cluster: HRGMv2_0469_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0469_75 HRGMv2_0469_75_4 3627 5003 + CBM50
pfam HRGMv2_0469_75 HRGMv2_0469_75_5 5009 5773 + OMP_b-brl_2
TC HRGMv2_0469_75 HRGMv2_0469_75_6 5777 7315 + 2.A.17.1.6
pfam HRGMv2_0469_75 HRGMv2_0469_75_7 7469 8458 + Exo_endo_phos | Exo_endo_phos_3
TC HRGMv2_0469_75 HRGMv2_0469_75_8 8543 10150 - 2.A.1.53.5
pfam HRGMv2_0469_75 HRGMv2_0469_75_9 10212 10574 - 23S_rRNA_IVP
peptidase HRGMv2_0469_75 HRGMv2_0469_75_10 10613 12751 - S09.UPC
TC HRGMv2_0469_75 HRGMv2_0469_75_11 12952 14847 - 2.A.9.3.1
TC HRGMv2_0469_75 HRGMv2_0469_75_12 15131 16438 + 9.B.168.1.2
Gene ID: HRGMv2_0469_75_4
Type: CAZyme
Location: 3627 - 5003 (+)
Gene ID: HRGMv2_0469_75_5
Type: pfam
Location: 5009 - 5773 (+)
Gene ID: HRGMv2_0469_75_6
Type: TC
Location: 5777 - 7315 (+)
Gene ID: HRGMv2_0469_75_7
Type: pfam
Location: 7469 - 8458 (+)
Gene ID: HRGMv2_0469_75_8
Type: TC
Location: 8543 - 10150 (-)
Gene ID: HRGMv2_0469_75_9
Type: pfam
Location: 10212 - 10574 (-)
Gene ID: HRGMv2_0469_75_10
Type: peptidase
Location: 10613 - 12751 (-)
Gene ID: HRGMv2_0469_75_11
Type: TC
Location: 12952 - 14847 (-)
Gene ID: HRGMv2_0469_75_12
Type: TC
Location: 15131 - 16438 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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