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Cluster: HRGMv2_0469_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0469_1 HRGMv2_0469_1_2 857 2728 - 1.C.39.4.5
NULL(UNKNOWN) HRGMv2_0469_1 HRGMv2_0469_1_3 3123 3227 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0469_1 HRGMv2_0469_1_4 3622 4305 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0469_1 HRGMv2_0469_1_5 4355 6337 + 3.D.10.1.5
TC HRGMv2_0469_1 HRGMv2_0469_1_6 6353 7108 + 3.D.10.1.5
NULL(UNKNOWN) HRGMv2_0469_1 HRGMv2_0469_1_7 7487 7684 + NULL(UNKNOWN)
[View Structural Homologs]
sulfatase HRGMv2_0469_1 HRGMv2_0469_1_8 7703 9811 + S1_25
CAZyme HRGMv2_0469_1 HRGMv2_0469_1_9 9922 12939 - CBM89 | GH10
Gene ID: HRGMv2_0469_1_2
Type: TC
Location: 857 - 2728 (-)
Gene ID: HRGMv2_0469_1_3
Type:
Location: 3123 - 3227 (-)
Gene ID: HRGMv2_0469_1_4
Type:
Location: 3622 - 4305 (+)
Gene ID: HRGMv2_0469_1_5
Type: TC
Location: 4355 - 6337 (+)
Gene ID: HRGMv2_0469_1_6
Type: TC
Location: 6353 - 7108 (+)
Gene ID: HRGMv2_0469_1_7
Type:
Location: 7487 - 7684 (+)
Gene ID: HRGMv2_0469_1_8
Type: sulfatase
Location: 7703 - 9811 (+)
Gene ID: HRGMv2_0469_1_9
Type: CAZyme
Location: 9922 - 12939 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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