Genome Details
Selected Rep_genome_ID: HRGMv2_0424
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma intestinavium
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0424 | 2,205,611 | 96.98% | 0.251% | UK | Europe | HRGM |
| MGYG000000889 | 2,172,459 | 96.23% | 0.19% | Denmark | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0424_CGC9 | CGCFAM_00080 | Yes | 6 | 2 | |
| HRGMv2_0424_CGC16 | CGCFAM_00156 | Yes | 4 | 2 | |
| HRGMv2_0424_CGC5 | CGCFAM_00266 | Yes | 3 | 1 | |
| HRGMv2_0424_CGC17 | CGCFAM_00349 | Yes | 8 | 1 | |
| HRGMv2_0424_CGC2 | CGCFAM_01330 | Yes | 8 | 3 | |
| HRGMv2_0424_CGC10 | CGCFAM_01592 | Yes | 4 | 3 | |
| HRGMv2_0424_CGC12 | CGCFAM_02546 | Yes | 6 | 1 | |
| HRGMv2_0424_CGC15 | CGCFAM_02604 | Yes | 4 | 1 | |
| HRGMv2_0424_CGC14 | CGCFAM_02779 | Yes | 3 | 1 | |
| HRGMv2_0424_CGC6 | CGCFAM_09669 | Yes | 7 | 3 |
Top CAZyme Families