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Cluster: HRGMv2_0424_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0424_2 HRGMv2_0424_2_69 68811 69452 - 2.A.76.1.6
pfam HRGMv2_0424_2 HRGMv2_0424_2_70 69723 71075 - Trigger_N
TC HRGMv2_0424_2 HRGMv2_0424_2_71 71368 72000 + 2.A.115.2.14
pfam HRGMv2_0424_2 HRGMv2_0424_2_72 72024 72602 - DUF308
pfam HRGMv2_0424_2 HRGMv2_0424_2_73 72740 73648 + DAGK_cat | YegS_C
CAZyme HRGMv2_0424_2 HRGMv2_0424_2_74 73768 75714 + GH133
CAZyme HRGMv2_0424_2 HRGMv2_0424_2_75 75741 77003 + GT4
CAZyme HRGMv2_0424_2 HRGMv2_0424_2_76 77017 78420 + GH57
Gene ID: HRGMv2_0424_2_69
Type: TC
Location: 68811 - 69452 (-)
Gene ID: HRGMv2_0424_2_70
Type: pfam
Location: 69723 - 71075 (-)
Gene ID: HRGMv2_0424_2_71
Type: TC
Location: 71368 - 72000 (+)
Gene ID: HRGMv2_0424_2_72
Type: pfam
Location: 72024 - 72602 (-)
Gene ID: HRGMv2_0424_2_73
Type: pfam
Location: 72740 - 73648 (+)
Gene ID: HRGMv2_0424_2_74
Type: CAZyme
Location: 73768 - 75714 (+)
Gene ID: HRGMv2_0424_2_75
Type: CAZyme
Location: 75741 - 77003 (+)
Gene ID: HRGMv2_0424_2_76
Type: CAZyme
Location: 77017 - 78420 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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