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Cluster: HRGMv2_0424_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0424_45 HRGMv2_0424_45_2 304 1314 + GT2
peptidase HRGMv2_0424_45 HRGMv2_0424_45_3 1315 2028 + C26.UPW
TC HRGMv2_0424_45 HRGMv2_0424_45_4 2205 2441 + 3.D.1.6.4
pfam HRGMv2_0424_45 HRGMv2_0424_45_5 2460 3725 + ketoacyl-synt | Ketoacyl-synt_C
pfam HRGMv2_0424_45 HRGMv2_0424_45_6 3734 4498 + dsrm | Ribonuclease_3 | Ribonucleas_3_3
TC HRGMv2_0424_45 HRGMv2_0424_45_7 4528 4899 + 2.A.7.34.3
pfam HRGMv2_0424_45 HRGMv2_0424_45_8 5092 6291 + Glycos_transf_2 | Glyco_tranf_2_3
TC HRGMv2_0424_45 HRGMv2_0424_45_9 6304 7566 + 2.A.40.5.1
Gene ID: HRGMv2_0424_45_2
Type: CAZyme
Location: 304 - 1314 (+)
Gene ID: HRGMv2_0424_45_3
Type: peptidase
Location: 1315 - 2028 (+)
Gene ID: HRGMv2_0424_45_4
Type: TC
Location: 2205 - 2441 (+)
Gene ID: HRGMv2_0424_45_5
Type: pfam
Location: 2460 - 3725 (+)
Gene ID: HRGMv2_0424_45_6
Type: pfam
Location: 3734 - 4498 (+)
Gene ID: HRGMv2_0424_45_7
Type: TC
Location: 4528 - 4899 (+)
Gene ID: HRGMv2_0424_45_8
Type: pfam
Location: 5092 - 6291 (+)
Gene ID: HRGMv2_0424_45_9
Type: TC
Location: 6304 - 7566 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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